Bioinformatics Support at CCR-SF:
The CCR-SF uses high-throughput sequencing technologies to enrich cancer research and ensure that the NCI community can remain at the leading edge of NGS. Since its inception in 2009, CCR-SF Bioinformatics group (CCR-SF IFX) provides a broad range of bioinformatics support services to CCR investigators and their collaborators. Our team has diverse expertise in bioinformatics pipeline development and NGS data analysis support. Our mission is to provide the highest quality of sequencing data to our customers. We work closely with investigators to help get their NGS projects off the ground.
General Questions and Answers for Bioinformatics
FAQMain Area of Support:
- Provide experimental design consultation including sequencing technology recommendation, library protocol consultation, sequencing coverage and cost estimate, etc.
- Perform QC, secondary and tertiary data analysis for sequencing data from different platforms, including Illumina, PacBio, Oxford Nanopore, and Bionano.
- Develop robust and reproducible analysis workflows/pipelines based on application types and sequencing technologies.
- Work closely with CCR-SF’s laboratory component, support adaptive new sequencing protocols and new technology development.
- Provide training to customers for NGS technology and data analysis.
New Analysis Services:
- Provide experimental design consultation including sequencing technology recommendation, library protocol consultation, sequencing coverage and cost estimate, etc.
- Perform QC, secondary and tertiary data analysis for sequencing data from different platforms, including Illumina, PacBio, Oxford Nanopore, and Bionano.
- Develop robust and reproducible analysis workflows/pipelines based on application types and sequencing technologies.
- Work closely with CCR-SF’s laboratory component, support adaptive new sequencing protocols and new technology development.
- Provide training to customers for NGS technology and data analysis.